Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015872892.1_cds_XP_016434940.1_30952
CDS Infomation

[gene=LOC107761248] [db_xref=GeneID:107761248] [protein=lysM domain-containing GPI-anchored protein 1-like] [protein_id=XP_016434940.1] [location=join(83185..83830,84257..84371,84474..84638,84719..84750,84871..85079)] [gbkey=CDS]
Sequence

ATGACAAGGAAAGTTGTTTTCCCTATTCTACTCCCAATTCTGCTTCTTTGTCTGCCATAT
TTTATGGTAGCAAAATCTGTGATTGAACCTTGTAATGCATCTGATTCATGCTCCTCTTAT
CTCTCCTATCGCCTTCCGTTGGACTCCAAGATTTCTGAAATAGCATTCAGGTTTAAAGTC
AATGTCTCTGATCTTTTAGCAGCCAACTCTATTGGTTCAAATCAAGTAAACCAAATCCAA
CCTGAAAAATCATTTGTGAAGATACCCATTTTGTGTTCATGTGTCAATGGCATACGACGA
TCTTCGTCTACTCATTACACGATTGGAGTAGCTGATACATTGATGTCAATATCAGAACTG
TATGGAGGACTTGTTAGTGCAGAACAGATTGGTATTGCAAATGGAGTTGATGCAGAACAT
CCTTTAGCCAGTGGACAGAGTCTTGTGATTCCTTTGCCATGTACATGTTTCAATAATAGC
AATAATGATGTAGACAGTGTGTACATGTCATATGTGGTACAGAGTGGAGATGACTTAACA
AGAATTGCAGCAGAATATGGTGTCACAGTTGGCAATTTGGAGATCATAAATGGGCTTGGT
CAACCTCAAATTGATCCTGGAGATATTCTGGCTATTCCTCTTGCTGCATGTTCAGCAGCA
AATCTGAATTGGTACAACGAAAGCCTAATAATTCCGAATGGTTCTTATGCTTTAACTGCT
AACAACTGCATCAAATGTGGCTGCAGTTCTACTGATCTCAGCATGGAGTGTTCAGCTTCA
GGAATTGTGGATAAATGTTCACATTTACAGTGCAAAGACTCCAATCTCTTTATCGGAGAA
AACCACGAAAAGCACACAGCATCTGGTAATTGCAATATTACAGCCTGCATTTATCGTGGA
CATCTTGGAGGCAAAACTTTTAGAAGTTTGGTGAATTCAACTGATGTCAAGTGTTTAGGT
AACCAGAGTCAACATACAGGGTTATCAATGGCGTCTCCAGCAACTGATTTGGCATTATCT
CCATCTCCATCCCCTTATTCAGCCAAAAGCCACACATTAGAACTCATGAATTCTAGTCCT
GCGCATAGACATAGCAAAAAATTGCTATCTCAAGCGTTACACTTTAGTTTATTGGTTTTG
GAGCTTATCCTTGAAATATTCTTGTAA

Peptide Sequence

PEP ID

XP_016434940.1
PEP Infomation

PREDICTED: lysM domain-containing GPI-anchored protein 1-like [Nicotiana tabacum]
Sequence

MTRKVVFPILLPILLLCLPYFMVAKSVIEPCNASDSCSSYLSYRLPLDSKISEIAFRFKV
NVSDLLAANSIGSNQVNQIQPEKSFVKIPILCSCVNGIRRSSSTHYTIGVADTLMSISEL
YGGLVSAEQIGIANGVDAEHPLASGQSLVIPLPCTCFNNSNNDVDSVYMSYVVQSGDDLT
RIAAEYGVTVGNLEIINGLGQPQIDPGDILAIPLAACSAANLNWYNESLIIPNGSYALTA
NNCIKCGCSSTDLSMECSASGIVDKCSHLQCKDSNLFIGENHEKHTASGNCNITACIYRG
HLGGKTFRSLVNSTDVKCLGNQSQHTGLSMASPATDLALSPSPSPYSAKSHTLELMNSSP
AHRHSKKLLSQALHFSLLVLELILEIFL

Transcript Sequence

Gene sequence data has not been registered.